Crossbow 1.2.0

AWS ID *

AWS Secret Key *

AWS Keypair Name

Look it up

Job name

Job type

Crossbow
Just preprocess reads

Input URL *

Output URL *

Input type

Preprocessed reads
Manifest file

Truncate length

(If blank or 0, truncation is disabled)

Skip reads shorter than truncate length

Discard fraction

Quality encoding

Genome/Annotation

Specify reference jar URL:

Bowtie options

SOAPsnp options

Additional SOAPsnp options for haploids

Additional SOAPSNP options for diploids

Chromosome ploidy

All chrosmosomes are diploid
All are haploid
All are diploid except:

Options

Keep cluster running after job finishes/aborts

# EC2 instances

Made with the help of

Please cite: Langmead B, Schatz MC, Lin J, Pop M, Salzberg SL. Searching for SNPs with cloud computing. Genome Biology 10:R134.